Close
Help





JOURNAL

Evolutionary Bioinformatics


An international, peer reviewed, open access journal focusing on evolutionary bioinformatics.  The journal aims to support understanding of organismal form and function through use of molecular, genetic, genomic and proteomic data by giving due consideration to its evolutionary context.

Impact Factor: 1.404 (2015)

Editor in Chief: Dr. Dennis Wall

ISSN: 1176-9343

Processing Speed: High quality, constructive peer review and rapid editorial decision within an average of four weeks.



Sign up for email alerts to receive notifications of new articles published in Evolutionary Bioinformatics

Article Search

Performance of Hidden Markov Models in Recovering the Standard Classification of Glycoside Hydrolases
Mariana Fonseca Rossi, Beatriz Mello, Carlos G Schrago
Evolutionary Bioinformatics 2017:13 1176934317703401
Original Research | Published on 20 Apr 2017



Free-Living Enterobacterium 24613: Complete Genome Sequence and Metabolic Profiling
Kateřina Snopková, Karel Sedlář, Juraj Bosák, Eva Chaloupková, Ivo Sedláček, Ivo Provazník, David Šmajs
Evolutionary Bioinformatics 2017:13 1176934317700863
Original Research | Published on 30 Mar 2017



A New Hybrid MGBPSO-GSA Variant for Improving Function Optimization Solution in Search Space
Narinder Singh, Sharandeep Singh, S B Singh
Evolutionary Bioinformatics 2017:13 1176934317699855
Original Research | Published on 22 Mar 2017



Numericware i: Identical by State Matrix Calculator
Bongsong Kim, William D Beavis
Evolutionary Bioinformatics 2017:13 1176934316688663
Software or database review | Published on 10 Mar 2017



Simulation-Based Evaluation of Hybridization Network Reconstruction Methods in the Presence of Incomplete Lineage Sorting
Olga K Kamneva, Noah A Rosenberg
Evolutionary Bioinformatics 2017:13 1176934317691935
Original Research | Published on 10 Mar 2017



A Method to Categorize 2-Dimensional Patterns Using Statistics of Spatial Organization
Juan López-Sauceda, Mara D Rueda-Contreras
Evolutionary Bioinformatics 2017:13 1176934317697978
Original Research | Published on 10 Mar 2017



Discovery and Characterisation of Castlerea Virus, a New Species of Isolated in Australia
Caitlin A O’Brien, Breeanna J McLean, Agathe M G Colmant, Jessica J Harrison, Sonja Hall-Mendelin, Andrew F van den Hurk, Cheryl A Johansen, Daniel Watterson, Helle Bielefeldt-Ohmann, Natalee D Newton, Benjamin L Schulz, Roy A Hall, Jody Hobson-Peters
Evolutionary Bioinformatics 2017:13 1176934317691269
Original Research | Published on 23 Feb 2017



The Transposon Provides Messages That Yield Unique Profiles of Protein Isoforms and Acts Synergistically With to Enrich Proteome Complexity via Exonization
Yuh-Chyang Charng, Lung-Hsin Hsu, Li-yu Daisy Liu
Evolutionary Bioinformatics 2017:13 1176934317690410
Original Research | Published on 23 Feb 2017



Corrigendum
Evolutionary Bioinformatics 2017:13 1176934316688670
Editorial | Published on 30 Jan 2017



Commensal Viruses of Mosquitoes: Host Restriction, Transmission, and Interaction with Arboviral Pathogens
Roy A. Hall, Helle Bielefeldt-Ohmann, Breeanna J. McLean, Caitlin A. O'Brien, Agathe M.G. Colmant, Thisun B.H. Piyasena, Jessica J. Harrison, Natalee D. Newton, Ross T. Barnard, Natalie A. Prow, Joshua M. Deerain, Marcus G.K.Y. Mah, and Jody Hobson-Peters
Evolutionary Bioinformatics 2016:Suppl. 2 35-44
Review | Published on 10 Jan 2017



Prefiltering Model for Homology Detection Algorithms on GPU
Germán Retamosa, Luis de Pedro, Ivan González and Javier Tamames
Evolutionary Bioinformatics 2016:12 313-322
Original Research | Published on 18 Dec 2016



Current Bacterial Gene Encoding Capsule Biosynthesis Protein CapI Contains Nucleotides Derived from Exonization
Yong Wang, Xia-Fang Tao, Zhi-Xi Su, A-Ke Liu, Tian-Lei Liu, Ling Sun, Qin Yao, Ke-Ping Chen and Xun Gu
Evolutionary Bioinformatics 2016:12 303-312
Short Report | Published on 12 Dec 2016



Support Vector Machines Trained with Evolutionary Algorithms Employing Kernel Adatron for Large Scale Classification of Protein Structures
Nancy Arana-Daniel, Alberto A. Gallegos, Carlos López-Franco, Alma Y. Alanís, Jacob Morales and Adriana López-Franco
Evolutionary Bioinformatics 2016:12 285-302
Original Research | Published on 04 Dec 2016



EvalMSA: A Program to Evaluate Multiple Sequence Alignments and Detect Outliers
Alvaro Chiner-Oms and Fernando González-Candelas
Evolutionary Bioinformatics 2016:12 277-284
Original Research | Published on 28 Nov 2016



A Comparative In Silico Study of the Antioxidant Defense Gene Repertoire of Distinct Lifestyle Trypanosomatid Species
Ingrid Thaís Beltrame-Botelho, Carlos Talavera-López, Björn Andersson, Edmundo Carlos Grisard and Patricia Hermes Stoco
Evolutionary Bioinformatics 2016:12 263-275
Original Research | Published on 07 Nov 2016



A Multilayered Screening Method for the Identification of Regulatory Genes in Rice by Agronomic Traits
Young-Joo Seol, So Youn Won, Younhee Shin, Jong-Yeol Lee, Jong-Sik Chun, Yong-Kab Kim and Chang-Kug Kim
Evolutionary Bioinformatics 2016:12 253-262
Original Research | Published on 02 Nov 2016



A Bioinformatics Approach for Detecting Repetitive Nested Motifs using Pattern Matching
José R. Romero, Jessica A. Carballido, Ingrid Garbus, Viviana C. Echenique and Ignacio Ponzoni
Evolutionary Bioinformatics 2016:12 247-251
Original Research | Published on 30 Oct 2016



IBBOMSA: An Improved Biogeography-based Approach for Multiple Sequence Alignment
Rohit Kumar Yadav and Haider Banka
Evolutionary Bioinformatics 2016:12 237-246
Original Research | Published on 27 Oct 2016



Comparative Genomics of Amphibian-like Ranaviruses, Nucleocytoplasmic Large DNA Viruses of Poikilotherms
Stephen J. Price
Evolutionary Bioinformatics 2015:Suppl. 2 71-82
Original Research | Published on 25 Oct 2016



A Novel Method for Alignment-free DNA Sequence Similarity Analysis Based on the Characterization of Complex Networks
Jie Zhou, Pianyu Zhong and Tinghui Zhang
Evolutionary Bioinformatics 2016:12 229-235
Original Research | Published on 06 Oct 2016



Approaching Long Genomic Regions and Large Recombination Rates with msParSm as an Alternative to MaCS
Carlos Montemuiño, Antonio Espinosa, Juan C. Moure, Gonzalo Vera, Porfidio Hernández and Sebastián Ramos-Onsins
Evolutionary Bioinformatics 2016:12 223-228
Software or database review | Published on 02 Oct 2016



Genomics Study of Mycobacterium tuberculosis Strains from Different Ethnic Populations in Taiwan
Horng-Yunn Dou, Yih-Yuan Chen, Ying-Tsong Chen, Jia-Ru Chang, Chien-Hsing Lin, Keh-Ming Wu, Ming-Shian Lin, Ih-Jen Su and Shih-Feng Tsai
Evolutionary Bioinformatics 2016:12 213-221
Original Research | Published on 27 Sep 2016



Virus Discovery Using Tick Cell Lines
Lesley Bell-Sakyi and Houssam Attoui
Evolutionary Bioinformatics 2016:Suppl. 2 31-34
Short Commentary | Published on 15 Sep 2016



Archival Collections are Important in the Study of the Biology, Diversity, and Evolution of Arboviruses
Alyssa T. Pyke and David Warrilow
Evolutionary Bioinformatics 2016:Suppl. 2 27-30
Commentary | Published on 14 Sep 2016



Revisiting Myosin Families Through Large-scale Sequence Searches Leads to the Discovery of New Myosins
Shaik Naseer Pasha, Iyer Meenakshi and Ramanathan Sowdhamini
Evolutionary Bioinformatics 2016:12 201-211
Original Research | Published on 29 Aug 2016



MultiSyn: A Webtool for Multiple Synteny Detection and Visualization of User’s Sequence of Interest Compared to Public Plant Species
Jeong-Ho Baek, Junah Kim, Chang-Kug Kim, Seong-Han Sohn, Dongsu Choi, Milind B. Ratnaparkhe, Do-Wan Kim and Tae-Ho Lee
Evolutionary Bioinformatics 2016:12 193-199
Original Research | Published on 28 Aug 2016



Molecular Evolution of the Yersinia Major Outer Membrane Protein C (OmpC)
Anna M. Stenkova, Evgeniya P. Bystritskaya, Konstantin V. Guzev, Alexander V. Rakin and Marina P. Isaeva
Evolutionary Bioinformatics 2016:12 185-191
Original Research | Published on 21 Aug 2016



Comparative Transcriptome Analysis Reveals Substantial Tissue Specificity in Human Aortic Valve
Jun Wang, Ying Wang, Weidong Gu, Buqing Ni, Haoliang Sun, Tong Yu, Wanjun Gu, Liang Chen and Yongfeng Shao
Evolutionary Bioinformatics 2016:12 175-184
Original Research | Published on 31 Jul 2016



Notes on the Statistical Power of the Binary State Speciation and Extinction (BiSSE) Model
Alexander Gamisch
Evolutionary Bioinformatics 2016:12 165-174
Original Research | Published on 26 Jul 2016



Investigating Evolutionary Dynamics of RHA1 Operons
Yong Chen, Dandan Geng, Kristina Ehrhardt and Shaoqiang Zhang
Evolutionary Bioinformatics 2016:12 157-163
Original Research | Published on 28 Jun 2016



Freshwater Metaviromics and Bacteriophages: A Current Assessment of the State of the Art in Relation to Bioinformatic Challenges
Katherine Bruder, Kema Malki, Alexandria Cooper, Emily Sible, Jason W. Shapiro, Siobhan C. Watkins and Catherine Putonti
Evolutionary Bioinformatics 2016:Suppl. 1 25-33
Review | Published on 20 Jun 2016



Twenty-Five New Viruses Associated with the Drosophilidae (Diptera)
Claire L. Webster, Ben Longdon, Samuel H. Lewis, and Darren J. Obbard
Evolutionary Bioinformatics 2016:Suppl. 2 13-25
Original Research | Published on 20 Jun 2016



Partitional Classification: A Complement to Phylogeny
Marc Salomon and Bruno Dassy
Evolutionary Bioinformatics 2016:12 149-156
Original Research | Published on 16 Jun 2016



Bioinformatic Characterization of Mosquito Viromes within the Eastern United States and Puerto Rico: Discovery of Novel Viruses
Kenneth G. Frey, Tara Biser, Theron Hamilton, Carlos J. Santos, Guillermo Pimentel, Vishwesh P. Mokashi and Kimberly A. Bishop-Lilly
Evolutionary Bioinformatics 2016:Suppl. 2 1-12
Original Research | Published on 16 Jun 2016



The Simple Chordate Ciona intestinalis Has a Reduced Complement of Genes Associated with Fanconi Anemia
Edward C. Stanley, Paul A. Azzinaro, David A. Vierra, Niall G. Howlett and Steven Q. Irvine
Evolutionary Bioinformatics 2016:12 133-148
Original Research | Published on 06 Jun 2016



Bipartite Graphs for Visualization Analysis of Microbiome Data
Karel Sedlar, Petra Videnska, Helena Skutkova, Ivan Rychlik and Ivo Provaznik
Evolutionary Bioinformatics 2016:Suppl. 1 17-23
Technical Advance | Published on 31 May 2016



Correction to: “Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages Under Selection”
Mathias Currat, Pascale Gerbault, Da Di, José M. Nunes and Alicia Sanchez-Mazas
Evolutionary Bioinformatics 2015:Suppl. 2 69-69
Correction | Published on 29 May 2016



Coevolution of RAC Small GTPases and their Regulators GEF Proteins
Alejandro Jiménez-Sánchez
Evolutionary Bioinformatics 2016:12 121-131
Original Research | Published on 17 May 2016



Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis
Vanessa Aguiar-Pulido, Wenrui Huang, Victoria Suarez-Ulloa, Trevor Cickovski, Kalai Mathee and Giri Narasimhan
Evolutionary Bioinformatics 2016:Suppl. 1 5-16
Review | Published on 12 May 2016



Phylogenetic and Structural Analysis of Polyketide Synthases in Aspergilli
Preetida J. Bhetariya, Madhvi Prajapati, Asani Bhaduri, Rahul Shubhra Mandal, Anupam Varma, Taruna Madan, Yogendra Singh and P. Usha Sarma
Evolutionary Bioinformatics 2016:12 109-119
Original Research | Published on 10 May 2016



Diversity and Evolution of Disease Resistance Genes in Barley (Hordeum vulgare L.)
Ethan J. Andersen, Shaukat Ali, R. Neil Reese, Yang Yen, Surendra Neupane and Madhav P. Nepal
Evolutionary Bioinformatics 2016:12 99-108
Original Research | Published on 04 May 2016



Estimating Divergence Times and Substitution Rates in Rhizobia
Rim Chriki-Adeeb and Ali Chriki
Evolutionary Bioinformatics 2016:12 87-97
Original Research | Published on 03 May 2016



Human Dispersal Out of Africa: A Lasting Debate
Saioa López, Lucy van Dorp and Garrett Hellenthal
Evolutionary Bioinformatics 2015:Suppl. 2 57-68
Review | Published on 21 Apr 2016



Introductory Editorial: Evolutionary Genomics
Yuval Itan, Gur Pines and Pascale Gerbault
Evolutionary Bioinformatics 2015:Suppl. 2 53-55
Editorial | Published on 20 Apr 2016



Surprisingly Low Limits of Selection in Plant Domestication
Robin G. Allaby, James L. Kitchen and Dorian Q. Fuller
Evolutionary Bioinformatics 2015:Suppl. 2 41-51
Original Research | Published on 05 Apr 2016



Genome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica
Xue Li, Jin-Zhong Xu, Wen-Jie Wang, Yi-Wang Chen, Dao-Qiong Zheng, Ya-Nan Di, Ping Li, Pin-Mei Wang and Yu-Dong Li
Evolutionary Bioinformatics 2016:Suppl. 1 1-4
Short Report | Published on 03 Apr 2016



Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages Under Selection
Mathias Currat, Pascale Gerbault, Da Di, José M. Nunes and Alicia Sanchez-Mazas
Evolutionary Bioinformatics 2015:Suppl. 2 27-39
Technical Advance | Published on 25 Feb 2016



Using UNIFORMAT and GENE[RATE] to Analyze Data with Ambiguities in Population Genetics
José Manuel Nunes
Evolutionary Bioinformatics 2015:Suppl. 2 19-26
Methodology | Published on 21 Feb 2016



Phi Class of Glutathione S-transferase Gene Superfamily Widely Exists in Nonplant Taxonomic Groups
Jean-Pierre Munyampundu, You-Ping Xu and Xin-Zhong Cai
Evolutionary Bioinformatics 2016:12 59-71
Original Research | Published on 10 Feb 2016



HTSFinder: Powerful Pipeline of DNA Signature Discovery by Parallel and Distributed Computing
Ramin Karimi and Andras Hajdu
Evolutionary Bioinformatics 2016:12 73-85
Technical Advance | Published on 10 Feb 2016





  • Efficient Processing: 4 Weeks Average to First Editorial Decision
  • Fair & Independent Expert Peer Review
  • High Visibility & Extensive Database Coverage
Services for Authors

Quick Links


New article and journal news notification services