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JOURNAL

Bioinformatics and Biology Insights


An international, peer reviewed, open access journal that focusses on computational methods used in the analysis and annotation of structures, in additional to other areas of computational biology.  The journal also seeks to place computational biology within the broader context of biology.

Editor in Chief: Professor Erich Bornberg-Bauer

ISSN: 1177-9322

Processing Speed: High quality, constructive peer review and rapid editorial decision within an average of four weeks.



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The Penna Model of Biological Aging
D. Stauffer
Bioinformatics and Biology Insights 2007:1 91-100
Published on 08 Feb 2008



The HapMap Resource is Providing New Insights into Ourselves and its Application to Pharmacogenomics
Wei Zhang, Mark J. Ratain and M. Eileen Dolan
Bioinformatics and Biology Insights 2008:2 15-23
Published on 01 Feb 2008



Using a Seed-Network to Query Multiple Large-Scale Gene Expression Datasets from the Developing Retina in Order to Identify and Prioritize Experimental Targets
Laura A. Hecker, Timothy C. Alcon, Vasant G. Honavar and M. Heather West Greenlee
Bioinformatics and Biology Insights 2008:2 401-412
Published on 01 Feb 2008



Structural Re-Alignment in an Immunogenic Surface Region of Ricin A Chain
Adam T. Zemla and Carol L. Ecale Zhou
Bioinformatic and Biology Insights 2008:2 5-13
Published on 01 Feb 2008



Beyond Field Effect: Analysis of Shrunken Centroids in Normal Esophageal Epithelia Detects Concomitant Esophageal Adenocarcinoma
Florin M. Selaru, Suna Wang, Jing Yin, Karsten Schulmann, Yan Xu, Yuriko Mori, Alexandru V. Olaru, Fumiaki Sato, James P. Hamilton, John M. Abraham, Paul Schneider, Bruce D. Greenwald, Jan Brabender and Stephen J. Meltzer
Bioinformatics and Biology Insights 2007:1 127-136
Published on 01 Feb 2008



Characterization of Non-Trivial Neighborhood Fold Constraints from Protein Sequences using Generalized Topohydrophobicity
Guillaume Fourty, Isabelle Callebaut and Jean-Paul Mornon
Bioinformatics and Biology Insights 2008:2 47-66
Published on 31 Jan 2008



HMM_RA: An Improved Method for Alpha-Helical Transmembrane Protein Topology Prediction
Jing Hu and Changhui Yan
Bioinformatics and Biology Insights 2008:2 67-74
Published on 31 Jan 2008



Including Functional Annotations and Extending the Collection of Structural Classifications of Protein Loops (ArchDB)
Antoni Hermoso, Jordi Espadaler, Enrique Querol, E, Francesc X. Aviles, Michael J.E. Sternberg, Baldomero Oliva and Narcis Fernandez-Fuentes
Bioinformatics and Biology Insights 2007:1 77-90
Published on 30 Jan 2008



Proteomic Analysis in Diabetic Cardiomyopathy using Bioinformatics Approach
Allam Appa Rao, Hanuman Thota, Ramamurthy Adapala, Suresh Babu Changalasetty, Ramachandra Sridhar Gumpeny, Annapurna Akula, Lalitha Saroja Thota, Siva Reddy Challa, M.R. Narasinga Rao and Undurti N. Das
Bioinformatics and Biology Insights 2008:2 1-4
Published on 21 Jan 2008



Peptide Vocabulary Analysis Reveals Ultra-Conservation and Homonymity in Protein Sequences
Derek Gatherer
Bioinformatics and Biology Insights 2007:1 101-126
Published on 12 Dec 2007



Software for Quantifying and Simulating Microsatellite Genotyping Error
Paul C.D. Johnson and Daniel T. Haydon
Bioinformatics and Biology Insights 2007:1 71-75
Published on 12 Nov 2007



Identifying Stress Transcription Factors Using Gene Expression and TF-Gene Association Data
Wei-Sheng Wu and Bor-Sen Chen
Bioinformatics and Biology Insights 2007:1 137-145
Published on 16 Oct 2007



Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines
Zhi Qun Tang, Hong Huang Lin, Hai Lei Zhang, Lian Yi Han, Xin Chen and Yu Zong Chen
Bioinformatics and Biology Insights 2007:1 19-47
Published on 15 Oct 2007



GSMA: Gene Set Matrix Analysis, An Automated Method for Rapid Hypothesis Testing of Gene Expression Data
Chris Cheadle, Tonya Watkins, Jinshui Fan, Marc A. Williams, Steven Georas, John Hall, Antony Rosen and Kathleen C. Barnes
Bioinformatics and Biology Insights 2007:1 49-62
Published on 15 Oct 2007



Screening the Single Nucleotide Polymorphisms in Patients with Internal Carotid Artery Stenosis by Oligonucleotide-Based Custom DNA Array
Kenji Nakai, Mayu Oyanagi, Jiro Hitomi, Kuniaki Ogasawara, Takashi Inoue, Masakazu Kobayashi, Keiko Nakai, Akira Suwabe, Wataru Habano, Toshiaki Baba, Hiroshi Yoshida and Akira Ogawa
Bioinformatics and Biology Insights 2007:1 63-69
Published on 12 Oct 2007



Rarity of Somatic Mutation and Frequency of Normal Sequence Variation Detected in Sporadic Colon Adenocarcinoma Using High-Throughput cDNA Sequencing
Takatsugu Kan, Bogdan C. Paun, Yuriko Mori, Fumiaki Sato, Zhe Jin, James P. Hamilton, Tetsuo Ito, Yulan Cheng, Stefan David, Alexandru V. Olaru, Jian Yang, Rachana Agarwal, John M. Abraham and Stephen J. Meltzer
Bioinformatics and Biology Insights 2007:1 1-16
Published on 17 Sep 2007



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